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v2.5.0 series come with new and improved sequence, structure, and dynamics analysis features. See release notes for details.
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Zhang S, Krieger JM, Zhang Y, Kaya C, Kaynak B, Mikulska-Ruminska K, Doruker P, Li H, Bahar I ProDy 2.0: Increased scale and scope after 10 years of protein dynamics modelling with Python Bioinformatics 2021 37(20):3657-3659.
This module defines classes for handling trajectory files in DCD format.
DCDFile parseDCD() writeDCD()
DCDFile
parseDCD()
writeDCD()
parsePSF()
Trajectory
Frame
Following examples show how to use trajectory classes and functions:
Trajectory Analysis Trajectory Analysis II Essential Dynamics Analysis