ProDy Documentation¶
- ProDy Manual
- ProDy Tutorial
- NMWiz Tutorial
- Evol Tutorial
- Druggability Suite
- Elastic Network Models
- Ensemble Analysis
- Structure Analysis
- Trajectory Analysis
- Conformational Sampling
- Collective Molecular Dynamics (CoMD) Simulations
- Membrane ANM
- Stiffness Matrix Calculations
- Perturbation Response Scanning Calculations
- Signature Dynamics
- Cryo-EM Dynamics (CryoDy)
- Adaptive ANM
- Essential Site Scanning Analysis (ESSA)
- ClustENMD
- Interactions and Stability (InSty) analysis
- WatFinder - water bridges within protein structure detector
- Scipion-EM-ProDy